Listening on http://127.0.0.1:41049

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
Warning in dir.create(path) :
  cannot create dir 'logs-qc', reason 'Permission denied'
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2023-11-27 09:40:01.353921 | timeMax: 2024-01-26 09:40:01.354506 | timeDiff: 5184000.00058508
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1168
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2023-11-27 08:40:01.354 | timeMax: 2024-01-26 08:40:01.355 | timeDiff: 5184000.00099993
nFacets: 4
nrow dataFiltered(): 1168
using 'ggh4x' package ...
nFacets: 4
nrow dataFiltered(): 1184
using 'ggh4x' package ...
Warning: Removed 19 rows containing missing values (`geom_point()`).
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 144
using 'ggh4x' package ...
nrow dataFiltered(): 208
using 'ggh4x' package ...
nrow dataFiltered(): 208
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-01-07 08:40:19.453 | timeMax: 2024-01-26 08:40:01.355 | timeDiff: 1641581.90199995
nFacets: 1
nrow dataFiltered(): 78
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 36
using 'ggh4x' package ...
nrow dataFiltered(): 78
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-01-16 08:40:43.991 | timeMax: 2024-01-26 08:40:01.355 | timeDiff: 863957.364000082
nFacets: 1
nrow dataFiltered(): 78
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 18
using 'ggh4x' package ...
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
nrow dataFiltered(): 78
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2023-12-25 08:40:50.249 | timeMax: 2024-01-26 08:40:01.355 | timeDiff: 2764751.10599995
nFacets: 1
nrow dataFiltered(): 91
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 108
using 'ggh4x' package ...
nrow dataFiltered(): 91
using 'ggh4x' package ...
nrow dataFiltered(): 108
using 'ggh4x' package ...
nrow dataFiltered(): 108
using 'ggh4x' package ...
NA
Warning in file(con, "w") :
  cannot open file 'logs-qc//shinylogs_fgczqcms-dashboard_1706258397583653000.json': No such file or directory
Warning: Error in file: cannot open the connection
  34: file
  33: writeLines
  32: jsonlite::write_json
  31: write_logs_json
  30: write_logs
  29: callback
   1: runApp
Warning in dir.create(path) :
  cannot create dir 'logs-qc', reason 'Permission denied'
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2023-11-27 09:43:36.943968 | timeMax: 2024-01-26 09:43:36.944556 | timeDiff: 5184000.00058818
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1168
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2023-11-27 08:43:36.944 | timeMax: 2024-01-26 08:43:36.945 | timeDiff: 5184000.00099993
nFacets: 4
nrow dataFiltered(): 1168
using 'ggh4x' package ...
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 216
using 'ggh4x' package ...
nrow dataFiltered(): 169
using 'ggh4x' package ...
NA
Warning in file(con, "w") :
  cannot open file 'logs-qc//shinylogs_fgczqcms-dashboard_1706258613693131000.json': No such file or directory
Warning: Error in file: cannot open the connection
  34: file
  33: writeLines
  32: jsonlite::write_json
  31: write_logs_json
  30: write_logs
  29: callback
   1: runApp


Execution halted