Listening on http://127.0.0.1:34687

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-01-26 22:57:16.431617 | timeMax: 2024-03-26 22:57:16.432207 | timeDiff: 5184000.00059056
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 594
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
nrow dataFiltered(): 299
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-01-26 21:57:16.43162 | timeMax: 2024-03-26 21:57:16.43221 | timeDiff: 5184000.00058985
nFacets: 1
nrow dataFiltered(): 299
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 594
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-01-26 21:57:16.432 | timeMax: 2024-03-26 21:57:16.432 | timeDiff: 5184000
nFacets: 1
nrow dataFiltered(): 299
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 594
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 104
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 846
using 'ggh4x' package ...
NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-02 07:58:09.834578 | timeMax: 2024-04-02 08:58:09.835148 | timeDiff: 5184000.00057054
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1104
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-02-02 06:58:09.835 | timeMax: 2024-04-02 06:58:09.835 | timeDiff: 5184000
nFacets: 4
nrow dataFiltered(): 1104
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
nFacets: 4
nrow dataFiltered(): 1664
using 'ggh4x' package ...
Warning: Removed 23 rows containing missing values (`geom_point()`).
Warning: Removed 17 rows containing missing values (`geom_line()`).
autoQC01 module APEX wide nrow: 264462
autoQC01 module APEX long nrow: 1248
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 48 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 0
nrow dataFiltered(): 416
using 'ggh4x' package ...
nrow dataFiltered(): 416
using 'ggh4x' package ...
NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-02 15:24:09.962065 | timeMax: 2024-04-02 16:24:09.96263 | timeDiff: 5184000.00056529
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-02-02 14:24:09.962 | timeMax: 2024-04-02 14:24:09.963 | timeDiff: 5184000.00100017
nFacets: 4
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-02 15:24:31.194932 | timeMax: 2024-04-02 16:24:31.195508 | timeDiff: 5184000.00057578
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-02-02 14:24:31.195 | timeMax: 2024-04-02 14:24:31.196 | timeDiff: 5184000.00100017
nFacets: 4
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-02 15:24:42.04654 | timeMax: 2024-04-02 16:24:42.047109 | timeDiff: 5184000.00056958
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-02-02 14:24:42.047 | timeMax: 2024-04-02 14:24:42.047 | timeDiff: 5184000
nFacets: 4
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-02 15:38:13.573796 | timeMax: 2024-04-02 16:38:13.574369 | timeDiff: 5184000.00057292
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-02-02 14:38:13.574 | timeMax: 2024-04-02 14:38:13.574 | timeDiff: 5184000
nFacets: 4
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-02 15:38:22.775501 | timeMax: 2024-04-02 16:38:22.77608 | timeDiff: 5184000.00057888
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-02-02 14:38:22.775 | timeMax: 2024-04-02 14:38:22.776 | timeDiff: 5184000.00099993
nFacets: 4
nrow dataFiltered(): 1088
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-03 13:53:20.831497 | timeMax: 2024-04-03 14:53:20.832062 | timeDiff: 5184000.00056481
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
input timeRange: 7776000 | timeMin: 2024-02-03 12:53:20.832 | timeMax: 2024-04-03 12:53:20.832 | timeDiff: 5184000
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 576
using 'ggh4x' package ...
nrow dataFiltered(): 286
using 'ggh4x' package ...