Listening on http://127.0.0.1:37667

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
Warning: Error in if: missing value where TRUE/FALSE needed
  1: runApp
input timeRange: 1209600 | timeMin: 2024-04-03 08:33:35.45903 | timeMax: 2024-04-10 08:33:35.459253 | timeDiff: 604800.000222445
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-10 07:33:51.660923 | timeMax: 2024-04-10 08:33:51.661534 | timeDiff: 5184000.00061083
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 558
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
nrow dataFiltered(): 299
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-02-10 06:33:51.66092 | timeMax: 2024-04-10 06:33:51.66153 | timeDiff: 5184000.00061011
nFacets: 1
nrow dataFiltered(): 299
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 558
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-02-10 06:33:51.661 | timeMax: 2024-04-10 06:33:51.662 | timeDiff: 5184000.00099993
nFacets: 1
nrow dataFiltered(): 299
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 558
using 'ggh4x' package ...
NA
NA
p34836/Proteomics/EXPLORIS_2/analytic_20240409/20240409_C34836_014_autoQC03dia.raw
NA
p34836/Proteomics/EXPLORIS_2/analytic_20240409/20240409_C34836_014_autoQC03dia.raw
NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-10 11:33:34.937559 | timeMax: 2024-04-10 12:33:34.938145 | timeDiff: 5184000.00058603
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
input timeRange: 7776000 | timeMin: 2024-02-10 10:33:34.938 | timeMax: 2024-04-10 10:33:34.938 | timeDiff: 5184000
nFacets: 4
nrow dataFiltered(): 1184
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
nFacets: 4
nrow dataFiltered(): 656
using 'ggh4x' package ...
Warning: Removed 1 rows containing missing values (`geom_point()`).
NA
p34853/Proteomics/EXPLORIS_1/tobiasko_20240409_ubiProbes/20240409_000_autoQC01.raw
p34853/Proteomics/EXPLORIS_1/tobiasko_20240409_ubiProbes/20240409_000_autoQC01.raw
p34836/Proteomics/EXPLORIS_2/analytic_20240409/20240409_C34836_014_autoQC03dia.raw
NA
p34627/Proteomics/EXPLORIS_2/analytic_20240327/20240327_C34627_021_autoQC03dia.raw
NA
p34474/Proteomics/EXPLORIS_2/analytic_20240328/20240328_C34474_035_autoQC03dia.raw
p34627/Proteomics/EXPLORIS_2/analytic_20240327/20240327_C34627_021_autoQC03dia.raw
p3000/Proteomics/EXPLORIS_2/analytic_20240325/20240325_007_autoQC03dia.raw
p34627/Proteomics/EXPLORIS_2/analytic_20240327/20240327_C34627_021_autoQC03dia.raw
NA
p34474/Proteomics/EXPLORIS_2/analytic_20240328/20240328_C34474_035_autoQC03dia.raw
p34627/Proteomics/EXPLORIS_2/analytic_20240327/20240327_C34627_021_autoQC03dia.raw
NA
p34627/Proteomics/EXPLORIS_2/analytic_20240327/20240327_C34627_021_autoQC03dia.raw
p3000/Proteomics/EXPLORIS_2/analytic_20240325/20240325_007_autoQC03dia.raw
NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-10 14:16:13.399729 | timeMax: 2024-04-10 15:16:13.400297 | timeDiff: 5184000.00056815
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
input timeRange: 7776000 | timeMin: 2024-02-10 13:16:13.4 | timeMax: 2024-04-10 13:16:13.4 | timeDiff: 5184000
nFacets: 1
nFacets: 1
nrow dataFiltered(): 558
using 'ggh4x' package ...
nrow dataFiltered(): 299
using 'ggh4x' package ...
NA
p34627/Proteomics/EXPLORIS_2/analytic_20240327/20240327_C34627_021_autoQC03dia.raw
p3000/Proteomics/EXPLORIS_2/analytic_20240325/20240325_007_autoQC03dia.raw
NA


Execution halted