Listening on http://127.0.0.1:37029

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-04-06 21:49:11.659125 | timeMax: 2024-06-05 21:49:11.65971 | timeDiff: 5184000.00058556
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1488
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
Warning: Removed 3 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-04-06 19:49:11.659 | timeMax: 2024-06-05 19:49:11.66 | timeDiff: 5184000.00100017
nFacets: 4
nrow dataFiltered(): 1488
using 'ggh4x' package ...
Warning: Removed 3 rows containing missing values (`geom_point()`).
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 396
using 'ggh4x' package ...
nrow dataFiltered(): 234
using 'ggh4x' package ...
NA
p35369/Proteomics/EXPLORIS_2/analytic_20240605/20240605_C35369_001_autoQC03dda.raw
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-04-07 11:06:42.256003 | timeMax: 2024-06-06 11:06:42.256571 | timeDiff: 5184000.00056744
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1520
using 'ggh4x' package ...
Warning: Removed 3 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-04-07 09:06:42.256 | timeMax: 2024-06-06 09:06:42.257 | timeDiff: 5184000.00099993
nFacets: 4
nrow dataFiltered(): 1520
using 'ggh4x' package ...
Warning: Removed 3 rows containing missing values (`geom_point()`).
nFacets: 4
nrow dataFiltered(): 1520
using 'ggh4x' package ...
Warning: Removed 84 rows containing missing values (`geom_point()`).
Warning: Removed 29 rows containing missing values (`geom_line()`).
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 0
nrow dataFiltered(): 325
using 'ggh4x' package ...
NA
p35407/Proteomics/QEXACTIVE_1/analytic_20240605/20240605_C35407_009_autoQC03dda.raw
p35338/Proteomics/QEXACTIVE_1/analytic_20240604/20240604_C35338_005_autoQC03dda.raw
nrow dataFiltered(): 325
using 'ggh4x' package ...


Execution halted