Listening on http://127.0.0.1:45343 Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr Loading required package: ggnewscale fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-04-27 16:53:51.277502 | timeMax: 2024-06-26 16:53:51.279068 | timeDiff: 5184000.00156641 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-27 14:53:51.278 | timeMax: 2024-06-26 14:53:51.279 | timeDiff: 5184000.00099993 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1360 Loading required package: ggh4x Loading required package: ggplot2 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 432 using 'ggh4x' package ... nrow dataFiltered(): 182 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 432 using 'ggh4x' package ... p35535/Proteomics/TIMSTOF_1/analytic_20240625_/zip/20240625_011_autoQC03dda.d.zip NA input timeRange: 7776000 | timeMin: 2024-03-28 14:53:59.0605 | timeMax: 2024-06-26 14:53:51.279 | timeDiff: 7775992.21850014 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 612 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-03-28 16:54:13.421529 | timeMax: 2024-06-26 14:53:51.279 | timeDiff: 7772377.85747099 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 612 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-03-28 15:54:13.422 | timeMax: 2024-06-26 14:53:51.279 | timeDiff: 7772377.85700011 nrow dataFiltered(): 26 using 'ggh4x' package ... Execution halted