Listening on http://127.0.0.1:40019 Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr Loading required package: ggnewscale fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-26 16:52:39.208268 | timeMax: 2024-07-25 16:52:39.208849 | timeDiff: 5184000.00058103 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 0 input timeRange: 7776000 | timeMin: 2024-05-26 14:52:39.208 | timeMax: 2024-07-25 14:52:39.209 | timeDiff: 5184000.00100017 nFacets: 4 nrow dataFiltered(): 0 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-27 09:43:08.989263 | timeMax: 2024-07-26 09:43:08.989871 | timeDiff: 5184000.00060749 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 0 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 342 Loading required package: ggh4x Loading required package: ggplot2 Attaching package: 'ggh4x' The following object is masked from 'package:ggplot2': guide_axis_logticks using 'ggh4x' package ... nrow dataFiltered(): 325 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-05-27 07:43:08.98926 | timeMax: 2024-07-26 07:43:08.98987 | timeDiff: 5184000.00061011 nFacets: 1 nrow dataFiltered(): 325 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 342 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-05-27 07:43:08.989 | timeMax: 2024-07-26 07:43:08.99 | timeDiff: 5184000.00099993 nFacets: 1 nrow dataFiltered(): 325 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 342 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-27 12:28:23.694777 | timeMax: 2024-07-26 12:28:23.695354 | timeDiff: 5184000.00057793 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 0 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 4 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2024-05-27 10:28:23.69478 | timeMax: 2024-07-26 10:28:23.69535 | timeDiff: 5184000.00057006 nFacets: 4 nrow dataFiltered(): 960 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 1 row containing missing values or values outside the scale range (`geom_line()`). input timeRange: 7776000 | timeMin: 2024-05-27 10:28:23.695 | timeMax: 2024-07-26 10:28:23.695 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 960 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 1 row containing missing values or values outside the scale range (`geom_line()`). nFacets: 5 nrow dataFiltered(): 1200 using 'ggh4x' package ... Warning: Removed 5 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 1 row containing missing values or values outside the scale range (`geom_line()`). nFacets: 6 nrow dataFiltered(): 1440 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 2 rows containing missing values or values outside the scale range (`geom_line()`). nFacets: 7 nrow dataFiltered(): 1680 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 2 rows containing missing values or values outside the scale range (`geom_line()`). nFacets: 8 nrow dataFiltered(): 1920 using 'ggh4x' package ... Warning: Removed 8 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 2 rows containing missing values or values outside the scale range (`geom_line()`). nFacets: 9 nrow dataFiltered(): 2160 using 'ggh4x' package ... Warning: Removed 8 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 2 rows containing missing values or values outside the scale range (`geom_line()`). nFacets: 10 nrow dataFiltered(): 2400 using 'ggh4x' package ... Warning: Removed 8 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 2 rows containing missing values or values outside the scale range (`geom_line()`). nFacets: 11 nrow dataFiltered(): 2640 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values or values outside the scale range (`geom_point()`). Warning: Removed 2 rows containing missing values or values outside the scale range (`geom_line()`). nFacets: 4 nFacets: 1 nrow dataFiltered(): 126 using 'ggh4x' package ... nrow dataFiltered(): 832 using 'ggh4x' package ... p35822/Proteomics/FUSION_2/analytic_20240719/20240719_C35822_007_autoQC03dda.raw NA NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-27 14:28:34.566355 | timeMax: 2024-07-26 14:28:34.567113 | timeDiff: 5184000.00075817 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 0 input timeRange: 7776000 | timeMin: 2024-05-27 12:28:34.566 | timeMax: 2024-07-26 12:28:34.567 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 0 Execution halted