Listening on http://127.0.0.1:40083

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

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Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-05-31 12:50:49.330747 | timeMax: 2024-07-30 12:50:49.331341 | timeDiff: 5184000.00059366
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

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Warning: Error in if: argument is of length zero
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Warning: Error in if: argument is of length zero
  97: renderUI
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  83: renderFunc
  82: output$autoQC03-DDA-ui
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reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
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  problems(dat)
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Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
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vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 450
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

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using 'ggh4x' package ...
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using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-05-31 10:50:49.33075 | timeMax: 2024-07-30 10:50:49.33134 | timeDiff: 5184000.00059009
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using 'ggh4x' package ...
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using 'ggh4x' package ...
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using 'ggh4x' package ...
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nrow dataFiltered(): 450
using 'ggh4x' package ...
p3000/Proteomics/TIMSTOF_1/spfammatter_20240729/zip/20240729_001_autoQC03dia.d.zip
plotClick: 
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NA
plotClick: 
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plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/TIMSTOF_1/spfammatter_20240729/zip/20240729_003_autoQC03dia.d.zip
p3000/Proteomics/TIMSTOF_1/spfammatter_20240729/zip/20240729_003_autoQC03dia.d.zip
p3000/Proteomics/TIMSTOF_1/spfammatter_20240729/zip/20240729_001_autoQC03dia.d.zip
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/TIMSTOF_1/spfammatter_20240729/zip/20240729_001_autoQC03dia.d.zip
plotClick: 
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p3000/Proteomics/TIMSTOF_1/spfammatter_20240729/zip/20240729_003_autoQC03dia.d.zip
NA
plotClick: 
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p3000/Proteomics/TIMSTOF_1/spfammatter_20240729/zip/20240729_004_autoQC03dda.d.zip
fn has changed to NA
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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
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   1: runApp
input timeRange: 7776000 | timeMin: 2024-05-31 14:36:52.511539 | timeMax: 2024-07-30 14:36:52.512116 | timeDiff: 5184000.0005765
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Warning: Error in if: argument is of length zero
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  83: renderFunc
  82: output$__autoQC01__-ui
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fn has changed to NA
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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
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  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-05-31 15:56:34.453734 | timeMax: 2024-07-30 15:56:34.454509 | timeDiff: 5184000.00077486
nFacets: 4
Warning: Error in if: argument is of length zero
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  96: func
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  82: output$__autoQC01__-ui
   1: runApp
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Warning: Error in if: argument is of length zero
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  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
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  problems(dat)
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Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
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using 'ggh4x' package ...
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using 'ggh4x' package ...
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nrow dataFiltered(): 91
using 'ggh4x' package ...
nFacets: 1
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using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-05-31 13:56:34.454 | timeMax: 2024-07-30 13:56:34.455 | timeDiff: 5184000.00099993
nFacets: 1
nrow dataFiltered(): 91
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 414
using 'ggh4x' package ...
NA
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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-05-31 22:38:50.347258 | timeMax: 2024-07-30 22:38:50.347842 | timeDiff: 5184000.00058413
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
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reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
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vals$rawrr: FALSE
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nrow dataFiltered(): 432
using 'ggh4x' package ...
nrow dataFiltered(): 91
using 'ggh4x' package ...
NA
plotClick: 
fn has changed to /srv/www/htdocs//p35923/Proteomics/TIMSTOF_1/analytic_20240730/zip/20240730_004_autoQC03dia.d.zip
p35923/Proteomics/TIMSTOF_1/analytic_20240730/zip/20240730_004_autoQC03dia.d.zip
p35923/Proteomics/TIMSTOF_1/analytic_20240730/zip/20240730_001_autoQC03dia.d.zip
plotClick: 
fn has changed to /srv/www/htdocs//p35923/Proteomics/TIMSTOF_1/analytic_20240730/zip/20240730_001_autoQC03dia.d.zip
p35923/Proteomics/TIMSTOF_1/analytic_20240730/zip/20240730_004_autoQC03dia.d.zip
plotClick: 
fn has changed to /srv/www/htdocs//p35923/Proteomics/TIMSTOF_1/analytic_20240730/zip/20240730_004_autoQC03dia.d.zip
NA


Execution halted