Listening on http://127.0.0.1:40459 Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr Loading required package: ggnewscale fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-06-08 23:11:11.855978 | timeMax: 2024-08-07 23:11:11.856561 | timeDiff: 5184000.00058246 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2024-06-08 21:11:11.856 | timeMax: 2024-08-07 21:11:11.857 | timeDiff: 5184000.00100017 nFacets: 4 nrow dataFiltered(): 1264 Loading required package: ggh4x Loading required package: ggplot2 Attaching package: 'ggh4x' The following object is masked from 'package:ggplot2': guide_axis_logticks using 'ggh4x' package ... Warning: Removed 1 row containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 nrow dataFiltered(): 1728 using 'ggh4x' package ... Warning: Removed 3 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2024-06-08 21:11:11.856 | timeMax: 2024-08-07 23:11:28.302635 | timeDiff: 5184016.44663477 nFacets: 4 nrow dataFiltered(): 1728 using 'ggh4x' package ... Warning: Removed 3 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2024-06-08 21:11:11.856 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 5184016.44700003 nFacets: 4 nrow dataFiltered(): 1728 using 'ggh4x' package ... Warning: Removed 3 rows containing missing values or values outside the scale range (`geom_point()`). p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_017_autoQC01.raw NA p3000/Proteomics/LUMOS_2/pgehrig_20240611/20240611_001_autoQC01.raw Warning in observe() : timeDiff is higher than timeRange NA input timeRange: 31536000 | timeMin: 2023-08-08 21:11:30.14177 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535998.1612298 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:04.566884 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535963.7361159 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:05.60155 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535962.7014501 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:06.611043 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535961.691957 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:07.61739 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535960.6856101 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:08.624288 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535959.6787121 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:09.63474 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535958.6682603 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:09.635 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535958.668 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:12.525303 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535955.7776971 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:13.539681 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535954.7633185 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:14.680149 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535953.6228509 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:14.68 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535953.6229999 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:17.475438 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535950.8275619 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:17.475 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535950.8280001 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:20.591337 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535947.7116632 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:20.591 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535947.7119999 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:23.52666 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535944.77634 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:24.55537 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535943.7476296 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:25.55778 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535942.7452204 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:25.558 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535942.7449999 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:28.455259 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535939.8477411 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:29.455821 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535938.8471789 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:30.489928 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535937.8130715 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:31.523348 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535936.7796519 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:31.523 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535936.78 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:34.486797 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535933.8162031 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:35.490919 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535932.8120813 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:36.52056 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535931.7824397 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:37.52624 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535930.7767596 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:38.55494 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535929.7480597 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:39.711269 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535928.5917313 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:39.711 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535928.592 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:42.554106 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535925.7488937 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:42.554 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535925.7490001 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:45.507161 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535922.7958391 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:45.507 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535922.796 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:48.354735 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535919.9482651 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 21:12:48.355 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535919.948 nFacets: 4 nrow dataFiltered(): 8864 using 'ggh4x' package ... Warning: Removed 34 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 31536000 | timeMin: 2023-08-08 23:12:51.188368 | timeMax: 2024-08-07 21:11:28.303 | timeDiff: 31535917.1146324 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-06-08 23:12:54.838914 | timeMax: 2024-08-07 23:12:54.839502 | timeDiff: 5184000.0005877 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2024-06-08 21:12:54.839 | timeMax: 2024-08-07 21:12:54.84 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 1264 using 'ggh4x' package ... Warning: Removed 1 row containing missing values or values outside the scale range (`geom_point()`). Warning in observe() : timeDiff is higher than timeRange NA p35993/Proteomics/EXPLORIS_2/analytic_20240806/20240806_C35993_004_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p35993/Proteomics/EXPLORIS_2/analytic_20240806/20240806_C35993_004_autoQC01.raw NA input timeRange: 7776000 | timeMin: 2024-07-19 21:12:55.479 | timeMax: 2024-08-07 21:12:54.84 | timeDiff: 1641599.36099982 nFacets: 4 nrow dataFiltered(): 400 using 'ggh4x' package ... p35993/Proteomics/EXPLORIS_2/analytic_20240806/20240806_C35993_004_autoQC01.raw NA p35993/Proteomics/EXPLORIS_2/analytic_20240806/20240806_C35993_004_autoQC01.raw plotClick: nFacets: 4 nrow dataFiltered(): 464 using 'ggh4x' package ... Warning: Removed 3 rows containing missing values or values outside the scale range (`geom_point()`). p3127/Proteomics/LUMOS_2/ackle_20240805_NL19_2/20240805_021_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p3127/Proteomics/LUMOS_2/ackle_20240805_NL19_2/20240805_021_autoQC01.raw NA p3127/Proteomics/LUMOS_2/ackle_20240719_NL20/20240719_026_autoQC01.raw vals$rawrr: TRUE Reading raw file: /srv/www/htdocs//p3127/Proteomics/LUMOS_2/ackle_20240805_NL19_2/20240805_021_autoQC01.raw Plotting chromatograms ... Read 22032 items Execution halted