Listening on http://127.0.0.1:43037

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-06-23 14:22:55.511689 | timeMax: 2024-08-22 14:22:55.512274 | timeDiff: 5184000.00058436
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1600
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
Warning: Removed 3 rows containing missing values or values outside the scale
range (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-06-23 12:22:55.512 | timeMax: 2024-08-22 12:22:55.512 | timeDiff: 5184000
nFacets: 4
nrow dataFiltered(): 1600
using 'ggh4x' package ...
Warning: Removed 3 rows containing missing values or values outside the scale
range (`geom_point()`).
nFacets: 4
nrow dataFiltered(): 1632
using 'ggh4x' package ...
Warning: Removed 3 rows containing missing values or values outside the scale
range (`geom_point()`).
nFacets: 2
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 342
using 'ggh4x' package ...
nrow dataFiltered(): 546
using 'ggh4x' package ...
NA
p3000/Proteomics/LUMOS_2/analytics_20240819/20240819_003_autoQC03dia.raw
p36033/Proteomics/LUMOS_2/analytic_20240816/20240816_C36033_030_autoQC03dia.raw
NA
NA
p3000/Proteomics/LUMOS_2/analytics_20240805/20240805_003_autoQC03dia.raw


Execution halted