Listening on http://127.0.0.1:36067

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-07-06 08:43:10.782821 | timeMax: 2024-09-04 08:43:10.783419 | timeDiff: 5184000.00059843
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 792
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
nrow dataFiltered(): 26
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-07-06 06:43:10.78282 | timeMax: 2024-09-04 06:43:10.78342 | timeDiff: 5184000.00059986
nFacets: 1
nrow dataFiltered(): 26
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 792
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-07-06 06:43:10.783 | timeMax: 2024-09-04 06:43:10.783 | timeDiff: 5184000
nFacets: 1
nrow dataFiltered(): 26
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 792
using 'ggh4x' package ...
p36111/Proteomics/TIMSTOF_1/jpelisek_20240902_/zip/20240902_019_autoQC03dia.d.zip
NA
NA
input timeRange: 7776000 | timeMin: 2024-06-06 06:43:13.25731 | timeMax: 2024-09-04 06:43:10.783 | timeDiff: 7775997.52568984
nFacets: 1
nrow dataFiltered(): 26
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 936
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-06-06 09:43:39.990323 | timeMax: 2024-09-04 06:43:10.783 | timeDiff: 7772370.79267716
nFacets: 1
nrow dataFiltered(): 26
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 936
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-06-06 07:43:39.99 | timeMax: 2024-09-04 06:43:10.783 | timeDiff: 7772370.79299998
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-07-06 09:02:24.422867 | timeMax: 2024-09-04 09:02:24.423499 | timeDiff: 5184000.00063205
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 252
using 'ggh4x' package ...
nrow dataFiltered(): 364
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-07-06 07:02:24.42287 | timeMax: 2024-09-04 07:02:24.4235 | timeDiff: 5184000.0006299
nFacets: 1
nrow dataFiltered(): 364
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 252
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-07-06 07:02:24.423 | timeMax: 2024-09-04 07:02:24.424 | timeDiff: 5184000.00099993
nFacets: 1
nrow dataFiltered(): 364
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 252
using 'ggh4x' package ...
NA
p3000/Proteomics/EXPLORIS_2/lkunz_20240902/20240902_003_autoQC03dia.raw
NA
p3000/Proteomics/EXPLORIS_2/lkunz_20240902/20240902_003_autoQC03dia.raw
p3000/Proteomics/EXPLORIS_2/lkunz_20240902/20240902_002_autoQC03dda.raw
p36073/Proteomics/EXPLORIS_2/analytic_20240829/20240828_C36073_013_autoQC03dda.raw


Execution halted