Listening on http://127.0.0.1:40367

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-07-14 09:09:07.120328 | timeMax: 2024-09-12 09:09:07.120907 | timeDiff: 5184000.00057864
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 4
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 216
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
nrow dataFiltered(): 520
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-07-14 07:09:07.12033 | timeMax: 2024-09-12 07:09:07.12091 | timeDiff: 5184000.00057983
nFacets: 4
nrow dataFiltered(): 520
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 216
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-07-14 07:09:07.12 | timeMax: 2024-09-12 07:09:07.121 | timeDiff: 5184000.00100017
nFacets: 4
nrow dataFiltered(): 520
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 216
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 273
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 0
NA
plotClick: 
fn has changed to /srv/www/htdocs//NA
plotClick: 
fn has changed to /srv/www/htdocs//p36271/Proteomics/QEXACTIVE_1/analytic_20240910/20240911_C36271_006_autoQC03dda.raw
p36271/Proteomics/QEXACTIVE_1/analytic_20240910/20240911_C36271_006_autoQC03dda.raw
p36271/Proteomics/QEXACTIVE_1/analytic_20240910/20240911_C36271_007_autoQC03dda.raw
NA
p36271/Proteomics/QEXACTIVE_1/analytic_20240910/20240911_C36271_005_autoQC03dda.raw
p36271/Proteomics/QEXACTIVE_1/analytic_20240910/20240911_C36271_006_autoQC03dda.raw
nFacets: 4
nrow dataFiltered(): 520
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 216
using 'ggh4x' package ...
p36250/Proteomics/FUSION_2/aeberle_20240909/20240909_005_autoQC03dia.raw
NA
nFacets: 0
nrow dataFiltered(): 0
nFacets: 1
nrow dataFiltered(): 0
Warning: Error in graphics::plot.new: figure margins too large
  104: graphics::plot.new
  101: startPNG
  100: plotPNG
   99: resizeSavedPlot
   97: func
   95: f
   94: Reduce
   85: do
   84: hybrid_chain
   83: renderFunc
   82: output$autoQC03-DDA-plot
    1: runApp
Warning: Error in graphics::plot.new: figure margins too large
  104: graphics::plot.new
  101: startPNG
  100: plotPNG
   99: resizeSavedPlot
   97: func
   95: f
   94: Reduce
   85: do
   84: hybrid_chain
   83: renderFunc
   82: output$autoQC03-DDA-plot
    1: runApp
nFacets: 1
Warning: Error in graphics::plot.new: figure margins too large
  130: graphics::plot.new
  127: startPNG
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$autoQC03-DDA-plot
    1: runApp
nFacets: 1
nrow dataFiltered(): 0
nrow dataFiltered(): 273
using 'ggh4x' package ...
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 736
using 'ggh4x' package ...
Warning: Removed 41 rows containing missing values or values outside the scale
range (`geom_point()`).
Warning: Removed 3 rows containing missing values or values outside the scale
range (`geom_line()`).
NA


Execution halted
Warning messages:
1: agg could not write to the given file 
2: agg could not write to the given file 
3: agg could not write to the given file