Listening on http://127.0.0.1:35955

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-08-05 07:38:11.311419 | timeMax: 2024-10-04 07:38:11.312001 | timeDiff: 5184000.0005815
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1056
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-08-05 05:38:11.311 | timeMax: 2024-10-04 05:38:11.312 | timeDiff: 5184000.00099993
nFacets: 4
nrow dataFiltered(): 1056
using 'ggh4x' package ...
nFacets: 4
nrow dataFiltered(): 768
using 'ggh4x' package ...
Warning: Removed 39 rows containing missing values or values outside the scale
range (`geom_point()`).
Warning: Removed 5 rows containing missing values or values outside the scale
range (`geom_line()`).
NA
nrow dataFiltered(): 768
using 'ggh4x' package ...
Warning: Removed 78 rows containing missing values or values outside the scale
range (`geom_point()`).
Warning: Removed 5 rows containing missing values or values outside the scale
range (`geom_line()`).
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 0
nrow dataFiltered(): 312
using 'ggh4x' package ...
NA
p36453/Proteomics/QEXACTIVE_1/analytic_20241003/20241003_C36453_011_autoQC03dda.raw
NA
nrow dataFiltered(): 312
using 'ggh4x' package ...
p36442/Proteomics/QEXACTIVE_1/analytic_20240930/20240930_C36442_007_autoQC03dda.raw
p36372/Proteomics/QEXACTIVE_1/analytic_20240926/20240926_C36372_005_autoQC03dda.raw
p36442/Proteomics/QEXACTIVE_1/analytic_20240930/20240930_C36442_007_autoQC03dda.raw


Execution halted