Listening on http://127.0.0.1:40403

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-08-11 16:42:09.219074 | timeMax: 2024-10-10 16:42:09.219682 | timeDiff: 5184000.00060844
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 286
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
  172: stop
  171: stopifnot
  170: .ggplot
  169: ggplot2FUN
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$autoQC03-DDA-plot
    1: runApp
nrow dataFiltered(): 270
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
  172: stop
  171: stopifnot
  170: .ggplot
  169: ggplot2FUN
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$autoQC03-DIA-plot
    1: runApp
nrow dataFiltered(): 270
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
nrow dataFiltered(): 286
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-08-11 14:42:09.21907 | timeMax: 2024-10-10 14:42:09.21968 | timeDiff: 5184000.00060987
nFacets: 1
nrow dataFiltered(): 286
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 270
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-08-11 14:42:09.219 | timeMax: 2024-10-10 14:42:09.22 | timeDiff: 5184000.00099993
nFacets: 1
nrow dataFiltered(): 286
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 270
using 'ggh4x' package ...
NA
p3000/Proteomics/EXPLORIS_2/lkunz_20241007/20241007_002_autoQC03dda.raw
nFacets: 1
nrow dataFiltered(): 299
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 180
using 'ggh4x' package ...
NA
p3000/Proteomics/EXPLORIS_1/lkunz_20241007/20241007_002_autoQC03dda.raw
nrow dataFiltered(): 299
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
  172: stop
  171: stopifnot
  170: .ggplot
  169: ggplot2FUN
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$autoQC03-DDA-plot
    1: runApp
nrow dataFiltered(): 299
using 'ggh4x' package ...
p3000/Proteomics/EXPLORIS_1/lkunz_20241007/20241007_002_autoQC03dda.raw
p3000/Proteomics/EXPLORIS_1/lkunz_20241007/20241007_003_autoQC03dia.raw
nrow dataFiltered(): 180
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
  172: stop
  171: stopifnot
  170: .ggplot
  169: ggplot2FUN
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$autoQC03-DIA-plot
    1: runApp
nrow dataFiltered(): 180
using 'ggh4x' package ...
NA
p3000/Proteomics/EXPLORIS_1/lkunz_20240930/20240930_002_autoQC03dda.raw
p3000/Proteomics/EXPLORIS_1/lkunz_20240923/20240923_002_autoQC03dda.raw


Execution halted