Listening on http://127.0.0.1:43697

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
Reading /scratch/DIAQC/qc/dump/autoQC01-fit-apex-auc-fwhm.txt ...
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-08-23 14:24:17.632652 | timeMax: 2024-10-22 14:24:17.633249 | timeDiff: 5184000.00059724
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1152
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
  172: stop
  171: stopifnot
  170: .ggplot
  169: ggplot2FUN
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$__autoQC01__-plot
    1: runApp
nrow dataFiltered(): 1152
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-08-23 12:24:17.633 | timeMax: 2024-10-22 12:24:17.633 | timeDiff: 5184000
nFacets: 4
nrow dataFiltered(): 1152
using 'ggh4x' package ...
nFacets: 4
nrow dataFiltered(): 928
using 'ggh4x' package ...
Warning: Removed 10 rows containing missing values or values outside the scale
range (`geom_point()`).
Warning: Removed 6 rows containing missing values or values outside the scale
range (`geom_line()`).
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/spfammatter_20241021/20241021_004r_autoQC01.raw
p3000/Proteomics/EXPLORIS_1/spfammatter_20241021/20241021_004r_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/spfammatter_20241021/20241021_001_autoQC01.raw
p3000/Proteomics/EXPLORIS_1/spfammatter_20241021/20241021_001_autoQC01.raw
p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_041_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_041_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_047_autoQC01.raw
p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_047_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_041_autoQC01.raw
p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_041_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_047_autoQC01.raw
p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_047_autoQC01.raw
p28115/Proteomics/EXPLORIS_1/wzhong_20241015_main_trial1_Oct16/20241015_036_autoQC01.raw
p3000/Proteomics/EXPLORIS_1/spfammatter_20241021/20241021_001_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/spfammatter_20241021/20241021_001_autoQC01.raw
p3000/Proteomics/EXPLORIS_1/spfammatter_20241021/20241021_001_autoQC01.raw
plotClick: 
Warning in file(con, "w") :
  cannot open file '/usr/local/lib/R/site-library/fgczqcms/shiny/fgczqcms-dashboard/logs-qc/shinylogs_fgczqcms-dashboard_1729599853443677000.json': Permission denied
Warning: Error in file: cannot open the connection
  34: file
  33: writeLines
  32: jsonlite::write_json
  31: write_logs_json
  30: write_logs
  29: callback
   1: runApp


Execution halted