Listening on http://127.0.0.1:42145 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save saving 'login and webservicepassword' ... In function read_workflowid read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(), : query failed. In function read_workflowid Request started from user chiawei Bfabric query: workflow containerid = 34647 saving 'login and webservicepassword' ... In function read_templatefile Bfabric query: dataset id Selected workflows ids: 5721 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5721 workflowtemplate step id 230 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation Selected workflows ids: 5721 Selected workflows ids: 5736 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5721 workflowtemplate step id 230 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 5736 workflowtemplate step id 244 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition Selected workflows ids: 5721 Selected workflows ids: 5736 Selected workflows ids: 5737 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5721 workflowtemplate step id 230 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 5736 workflowtemplate step id 244 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition In function read_steptemplateid Bfabric query: workflowstep workflowid = 5737 workflowtemplate step id 291 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 59 workflowtemplate name: Proteomics Data analysis Selected workflows ids: 5721 Selected workflows ids: 5736 Selected workflows ids: 5737 Selected workflows ids: 5738 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5721 workflowtemplate step id 230 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 5736 workflowtemplate step id 244 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition In function read_steptemplateid Bfabric query: workflowstep workflowid = 5737 workflowtemplate step id 291 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 59 workflowtemplate name: Proteomics Data analysis In function read_steptemplateid Bfabric query: workflowstep workflowid = 5738 workflowtemplate step id 260 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 60 workflowtemplate name: Proteomics Results saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... generateReport In function read_steptemplateid Bfabric query: workflowstep workflowid = 5721 workflowtemplate step id 230 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5736 workflowtemplate step id 244 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5737 workflowtemplate step id 291 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5738 workflowtemplate step id 260 processing file: report.Rmd output file: report.knit.md Output created: fgcz_order_report-34647.pdf generateReport In function read_steptemplateid Bfabric query: workflowstep workflowid = 5721 workflowtemplate step id 230 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5736 workflowtemplate step id 244 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5737 workflowtemplate step id 291 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5738 workflowtemplate step id 260 processing file: report.Rmd output file: report.knit.md Output created: fgcz_order_report-34647.pdf bfabricUpload Execution halted