Listening on http://127.0.0.1:37371 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save saving 'login and webservicepassword' ... In function read_workflowid read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Request started from user spfammatter Bfabric query: workflow containerid = 34926 saving 'login and webservicepassword' ... In function read_templatefile Bfabric query: dataset id Selected workflows ids: 5995 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5995 workflowtemplate step id 239 workflowtemplate step id 226 workflowtemplate step id 239 workflowtemplate step id 231 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation saving 'login and webservicepassword' ... Selected workflows ids: 5995 Selected workflows ids: 6017 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5995 workflowtemplate step id 239 workflowtemplate step id 226 workflowtemplate step id 239 workflowtemplate step id 231 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 6017 workflowtemplate step id 269 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition Selected workflows ids: 5995 Selected workflows ids: 6017 Selected workflows ids: 6043 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5995 workflowtemplate step id 239 workflowtemplate step id 226 workflowtemplate step id 239 workflowtemplate step id 231 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 6017 workflowtemplate step id 269 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition In function read_steptemplateid Bfabric query: workflowstep workflowid = 6043 workflowtemplate step id 250 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 59 workflowtemplate name: Proteomics Data analysis Selected workflows ids: 5995 Selected workflows ids: 6017 Selected workflows ids: 6043 Selected workflows ids: 6045 In function read_steptemplateid Bfabric query: workflowstep workflowid = 5995 workflowtemplate step id 239 workflowtemplate step id 226 workflowtemplate step id 239 workflowtemplate step id 231 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 6017 workflowtemplate step id 269 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition In function read_steptemplateid Bfabric query: workflowstep workflowid = 6043 workflowtemplate step id 250 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 59 workflowtemplate name: Proteomics Data analysis In function read_steptemplateid Bfabric query: workflowstep workflowid = 6045 workflowtemplate step id 256 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 60 workflowtemplate name: Proteomics Results saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... generateReport In function read_steptemplateid Bfabric query: workflowstep workflowid = 5995 workflowtemplate step id 239 workflowtemplate step id 226 workflowtemplate step id 239 workflowtemplate step id 231 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6017 workflowtemplate step id 269 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6043 workflowtemplate step id 250 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6045 workflowtemplate step id 256 processing file: report.Rmd output file: report.knit.md Output created: fgcz_order_report-34926.pdf bfabricUpload generateReport In function read_steptemplateid Bfabric query: workflowstep workflowid = 5995 workflowtemplate step id 239 workflowtemplate step id 226 workflowtemplate step id 239 workflowtemplate step id 231 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6017 workflowtemplate step id 269 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6043 workflowtemplate step id 250 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6045 workflowtemplate step id 256 processing file: report.Rmd output file: report.knit.md Output created: fgcz_order_report-34926.pdf bfabricUpload Execution halted