Listening on http://127.0.0.1:34557 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save saving 'login and webservicepassword' ... In function read_workflowid read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Request started from user schesnov Bfabric query: workflow containerid = 36259 saving 'login and webservicepassword' ... In function read_templatefile Bfabric query: dataset id Selected workflows ids: 7015 In function read_steptemplateid Bfabric query: workflowstep workflowid = 7015 workflowtemplate step id 277 workflowtemplate step id 276 workflowtemplate step id 275 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 61 workflowtemplate name: Analysis procedure: Purified Biomolecules saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... In function read_workflowid read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Request started from user lkunz Bfabric query: workflow containerid = 36111 saving 'login and webservicepassword' ... In function read_templatefile Bfabric query: dataset id Selected workflows ids: 6978 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6978 workflowtemplate step id 272 workflowtemplate step id 239 workflowtemplate step id 225 workflowtemplate step id 239 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation Selected workflows ids: 6978 Selected workflows ids: 6985 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6978 workflowtemplate step id 272 workflowtemplate step id 239 workflowtemplate step id 225 workflowtemplate step id 239 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 6985 workflowtemplate step id 243 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition Selected workflows ids: 6978 Selected workflows ids: 6985 Selected workflows ids: 7008 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6978 workflowtemplate step id 272 workflowtemplate step id 239 workflowtemplate step id 225 workflowtemplate step id 239 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 6985 workflowtemplate step id 243 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition In function read_steptemplateid Bfabric query: workflowstep workflowid = 7008 workflowtemplate step id 254 workflowtemplate step id 254 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 59 workflowtemplate name: Proteomics Data analysis Selected workflows ids: 6978 Selected workflows ids: 6985 Selected workflows ids: 7008 Selected workflows ids: 7017 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6978 workflowtemplate step id 272 workflowtemplate step id 239 workflowtemplate step id 225 workflowtemplate step id 239 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 6985 workflowtemplate step id 243 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition In function read_steptemplateid Bfabric query: workflowstep workflowid = 7008 workflowtemplate step id 254 workflowtemplate step id 254 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 59 workflowtemplate name: Proteomics Data analysis In function read_steptemplateid Bfabric query: workflowstep workflowid = 7017 workflowtemplate step id 256 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 60 workflowtemplate name: Proteomics Results Selected workflows ids: 6978 Selected workflows ids: 6985 Selected workflows ids: 7008 Selected workflows ids: 7017 Selected workflows ids: 7018 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6978 workflowtemplate step id 272 workflowtemplate step id 239 workflowtemplate step id 225 workflowtemplate step id 239 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 57 workflowtemplate name: Proteomics Sample Preparation In function read_steptemplateid Bfabric query: workflowstep workflowid = 6985 workflowtemplate step id 243 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 58 workflowtemplate name: Proteomics Data acquisition In function read_steptemplateid Bfabric query: workflowstep workflowid = 7008 workflowtemplate step id 254 workflowtemplate step id 254 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 59 workflowtemplate name: Proteomics Data analysis In function read_steptemplateid Bfabric query: workflowstep workflowid = 7017 workflowtemplate step id 256 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 60 workflowtemplate name: Proteomics Results In function read_steptemplateid Bfabric query: workflowstep workflowid = 7018 workflowtemplate step id 259 In function read_workflowtemplate Bfabric query: workflowtemplate workflowtemplateid = 60 workflowtemplate name: Proteomics Results saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... generateReport In function read_steptemplateid Bfabric query: workflowstep workflowid = 7015 workflowtemplate step id 277 workflowtemplate step id 276 workflowtemplate step id 275 processing file: report.Rmd output file: report.knit.md Output created: fgcz_order_report-36259.pdf bfabricUpload generateReport In function read_steptemplateid Bfabric query: workflowstep workflowid = 6978 workflowtemplate step id 272 workflowtemplate step id 239 workflowtemplate step id 225 workflowtemplate step id 239 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6985 workflowtemplate step id 243 In function read_steptemplateid Bfabric query: workflowstep workflowid = 7008 workflowtemplate step id 254 workflowtemplate step id 254 In function read_steptemplateid Bfabric query: workflowstep workflowid = 7017 workflowtemplate step id 256 In function read_steptemplateid Bfabric query: workflowstep workflowid = 7018 workflowtemplate step id 259 processing file: report.Rmd output file: report.knit.md Output created: fgcz_order_report-36111.pdf bfabricUpload bfabricUpload generateReport In function read_steptemplateid Bfabric query: workflowstep workflowid = 6978 workflowtemplate step id 272 workflowtemplate step id 239 workflowtemplate step id 225 workflowtemplate step id 239 In function read_steptemplateid Bfabric query: workflowstep workflowid = 6985 workflowtemplate step id 243 In function read_steptemplateid Bfabric query: workflowstep workflowid = 7008 workflowtemplate step id 254 workflowtemplate step id 254 In function read_steptemplateid Bfabric query: workflowstep workflowid = 7017 workflowtemplate step id 256 In function read_steptemplateid Bfabric query: workflowstep workflowid = 7018 workflowtemplate step id 259 processing file: report.Rmd output file: report.knit.md Output created: fgcz_order_report-36111.pdf bfabricUpload Execution halted