Listening on http://127.0.0.1:45907 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save Loading required package: base64enc Loading required package: jsonlite Attaching package: 'jsonlite' The following object is masked from 'package:shiny': validate Loading required package: httr Loading required package: DT Attaching package: 'DT' The following objects are masked from 'package:shiny': dataTableOutput, renderDataTable Loading required package: dplyr Attaching package: 'dplyr' The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union Loading required package: XML System configuration: debug output$download values$wuid= read bfabricposturl http://localhost:5000/. read login pfeeder. System configuration: debug output$download values$wuid= read bfabricposturl http://localhost:5000/. read login pfeeder. System configuration: Proteomics XCalibur debug output$download values$wuid= read webservicepassword for login pfeeder. System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= Composing XCalibur MS configuration file /tmp/RtmpW1PTAI/file1f62fe6145122d.csv ... Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE, : appending column names to file containerid = 3530 debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics HyStar M-CLASS48_48 DEBUG table_rows_current, folder, end1, targets, table_cell_clicked, method, QC02o, instrumentControlSoftware, instrument, table_state, area, QC01m, container, autoQC01, startposition, cleano, table_rows_selected, table_columns_selected, QC02m, lcSystem, start2, replicates, end2, sample, start1, QC4Lm, download, table_rows_all, login, containerType, autoQC4L, autoQC02, table_cells_selected, QC01o, testmethods, end3, start3, QC4Lo, generate, table_search, cleanm, clean debug output$download values$wuid=287454 debug output$download values$wuid=287454 System configuration: Proteomics HyStar nanoElute54_54 DEBUG table_rows_current, folder, end1, targets, table_cell_clicked, method, QC02o, instrumentControlSoftware, instrument, table_state, area, QC01m, container, autoQC01, startposition, cleano, table_rows_selected, table_columns_selected, QC02m, lcSystem, start2, replicates, end2, sample, start1, QC4Lm, download, table_rows_all, login, containerType, autoQC4L, autoQC02, table_cells_selected, QC01o, testmethods, end3, start3, QC4Lo, generate, table_search, cleanm, clean debug output$download values$wuid=287454 debug output$download values$wuid=287454 Execution halted