Listening on http://127.0.0.1:42577
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

Loading required package: base64enc
Loading required package: jsonlite

Attaching package: 'jsonlite'

The following object is masked from 'package:shiny':

    validate

Loading required package: httr
Loading required package: DT

Attaching package: 'DT'

The following objects are masked from 'package:shiny':

    dataTableOutput, renderDataTable

Loading required package: dplyr

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Loading required package: XML
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d78ceda25.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  33642
debug output$download values$wuid=298798
debug output$download values$wuid=298798
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d79d8aa55.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34024
containerid =   34040
debug output$download values$wuid=298822
debug output$download values$wuid=298822
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d3183c76a.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34007
debug output$download values$wuid=298827
debug output$download values$wuid=298827
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
Warning: Error in if: missing value where TRUE/FALSE needed
  127: .autoQC
  126: .clean
  125: generate_queue
  124: bfabricShiny:::generate_queue_order
  123: <reactive:getBfabricContent> [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#397]
  107: getBfabricContent
  104: exprFunc
  103: widgetFunc
  102: ::
htmlwidgets
shinyRenderWidget
  101: func
   88: renderFunc
   87: renderFunc
   83: renderFunc
   82: output$table
    1: runApp
Warning: Error in if: missing value where TRUE/FALSE needed
  100: <Anonymous>
   99: stop
   98: getBfabricContent
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#582]
   96: func
   83: renderFunc
   82: output$download
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d3e4a59b0.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34029
debug output$download values$wuid=298842
debug output$download values$wuid=298842
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=298842
debug output$download values$wuid=298842
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d159f372e.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34029
debug output$download values$wuid=298844
debug output$download values$wuid=298844
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d73f8e952.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  33994
debug output$download values$wuid=298846
debug output$download values$wuid=298846
System configuration:   
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d3d34e645.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34009
debug output$download values$wuid=298895
debug output$download values$wuid=298895
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d58283645.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  33994
debug output$download values$wuid=298930
debug output$download values$wuid=298930
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d14a78014.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  33956
debug output$download values$wuid=298963
debug output$download values$wuid=298963
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d186cf5bf.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34068
debug output$download values$wuid=298973
debug output$download values$wuid=298973
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
Warning: Error in strsplit: non-character argument
  115: strsplit
  114: <reactive:getSample> [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#289]
   98: getSample
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#320]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d19c1fad9.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  33980
debug output$download values$wuid=298986
debug output$download values$wuid=298986
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
Warning: Error in if: missing value where TRUE/FALSE needed
  127: .autoQC
  126: .clean
  125: generate_queue
  124: bfabricShiny:::generate_queue_order
  123: <reactive:getBfabricContent> [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#397]
  107: getBfabricContent
  104: exprFunc
  103: widgetFunc
  102: ::
htmlwidgets
shinyRenderWidget
  101: func
   88: renderFunc
   87: renderFunc
   83: renderFunc
   82: output$table
    1: runApp
Warning: Error in if: missing value where TRUE/FALSE needed
  100: <Anonymous>
   99: stop
   98: getBfabricContent
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#582]
   96: func
   83: renderFunc
   82: output$download
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d2446fa44.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34069
containerid =   34072
debug output$download values$wuid=298999
debug output$download values$wuid=298999
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d6b7e64eb.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34077
containerid =   34024
debug output$download values$wuid=299021
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
debug output$download values$wuid=299021
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=299021
debug output$download values$wuid=299021
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
Warning: The select input "sample" contains a large number of options; consider using server-side selectize for massively improved performance. See the Details section of the ?selectizeInput help topic.
Warning: The select input "login" contains a large number of options; consider using server-side selectize for massively improved performance. See the Details section of the ?selectizeInput help topic.
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d6f564a61.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34034
debug output$download values$wuid=299041
debug output$download values$wuid=299041
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
Warning: Error in $: $ operator is invalid for atomic vectors
  101: paste0
   97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326]
   96: func
   83: renderFunc
   82: output$sample
    1: runApp
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d2365817a.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  34061
debug output$download values$wuid=299042
debug output$download values$wuid=299042
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d61cb1e1c.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  33970
containerid =   33994
debug output$download values$wuid=299062
debug output$download values$wuid=299062
Composing XCalibur MS configuration file /tmp/RtmpD8yswk/file1dd88d761f25ba.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  33970
containerid =   33994
debug output$download values$wuid=299064
debug output$download values$wuid=299064


Execution halted