Listening on http://127.0.0.1:38743 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save Loading required package: base64enc Loading required package: jsonlite Attaching package: 'jsonlite' The following object is masked from 'package:shiny': validate Loading required package: httr Loading required package: DT Attaching package: 'DT' The following objects are masked from 'package:shiny': dataTableOutput, renderDataTable Loading required package: dplyr Attaching package: 'dplyr' The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union Loading required package: XML System configuration: debug output$download values$wuid= read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. read login pfeeder. System configuration: Proteomics XCalibur debug output$download values$wuid= read webservicepassword for login pfeeder. System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= Warning: Error in $: $ operator is invalid for atomic vectors 101: paste0 97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326] 96: func 83: renderFunc 82: output$sample 1: runApp System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= Composing XCalibur MS configuration file /tmp/RtmpqkCTkn/fileb8cf36dbd88f3.csv ... Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE, : appending column names to file containerid = 34192 debug output$download values$wuid=299596 debug output$download values$wuid=299596 System configuration: debug output$download values$wuid= read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. read login pfeeder. System configuration: Proteomics XCalibur debug output$download values$wuid= read webservicepassword for login pfeeder. System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= System configuration: debug output$download values$wuid= read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. read login pfeeder. System configuration: Proteomics XCalibur debug output$download values$wuid= read webservicepassword for login pfeeder. Warning: Error in $: $ operator is invalid for atomic vectors 101: paste0 97: renderUI [/usr/local/lib/R/site-library/bfabricShiny/shiny/queue_generator10/server.R#326] 96: func 83: renderFunc 82: output$sample 1: runApp System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= Composing XCalibur MS configuration file /tmp/RtmpqkCTkn/fileb8cf3b3d0d27.csv ... Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE, : appending column names to file containerid = 34193 debug output$download values$wuid=299602 debug output$download values$wuid=299602 Composing XCalibur MS configuration file /tmp/RtmpqkCTkn/fileb8cf3f966dc6.csv ... Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE, : appending column names to file containerid = 34193 debug output$download values$wuid=299603 debug output$download values$wuid=299603 System configuration: debug output$download values$wuid= read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. read login pfeeder. System configuration: Proteomics XCalibur debug output$download values$wuid= read webservicepassword for login pfeeder. System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= debug output$download values$wuid= Composing XCalibur MS configuration file /tmp/RtmpqkCTkn/fileb8cf36ab491d2.csv ... Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE, : appending column names to file containerid = 34218 debug output$download values$wuid=299616 debug output$download values$wuid=299616 System configuration: debug output$download values$wuid= read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. read login pfeeder. System configuration: Proteomics XCalibur debug output$download values$wuid= read webservicepassword for login pfeeder. System configuration: Proteomics XCalibur M-CLASS48_48 debug output$download values$wuid= Execution halted