Listening on http://127.0.0.1:38041
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

Loading required package: base64enc
Loading required package: jsonlite

Attaching package: 'jsonlite'

The following object is masked from 'package:shiny':

    validate

Loading required package: httr
Loading required package: DT

Attaching package: 'DT'

The following objects are masked from 'package:shiny':

    dataTableOutput, renderDataTable

Loading required package: dplyr

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Loading required package: XML
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics HyStar 
debug output$download values$wuid=
System configuration: Proteomics HyStar M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics HyStar nanoElute54_54
debug output$download values$wuid=
System configuration: Proteomics HyStar nanoElute54_54
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
Composing HyStar XML MS configuration file /tmp/Rtmp2uAMxc/file10345d22146c81.xml ...
Warning in xmlRoot.XMLInternalDocument(currentNodes[[1]]) :
  empty XML document
Saving XML ...
containerid =  36315
DEBUG: wuid=
DEBUG: rv wuid=315371
DEBUG: wuid=315371
debug output$download values$wuid=315371
debug output$download values$wuid=315371
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, download, generate, lcSystem, instrument
debug output$download values$wuid=315371
debug output$download values$wuid=315371
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics HyStar 
debug output$download values$wuid=
System configuration: Proteomics HyStar M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics HyStar nanoElute54_54
debug output$download values$wuid=
System configuration: Proteomics HyStar nanoElute54_54
debug output$download values$wuid=
System configuration: Proteomics HyStar nanoElute54_54
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, generate, lcSystem, instrument
debug output$download values$wuid=
debug output$download values$wuid=
Composing HyStar XML MS configuration file /tmp/Rtmp2uAMxc/file10345d842e39b.xml ...
Warning in xmlRoot.XMLInternalDocument(currentNodes[[1]]) :
  empty XML document
Saving XML ...
containerid =  36316
DEBUG: wuid=
DEBUG: rv wuid=315372
DEBUG: wuid=315372
debug output$download values$wuid=315372
debug output$download values$wuid=315372
System configuration: Proteomics HyStar EVOSEP1x12x8
DEBUG
container, start1, start2, start3, end1, end2, end3, QC01m, QC01o, QC02m, QC02o, QC4Lm, QC4Lo, cleanm, cleano, startposition, targets, sample, login, table_cell_clicked, table_search, table_state, table_rows_all, table_rows_current, table_cells_selected, table_columns_selected, table_rows_selected, clean, autoQC4L, autoQC02, autoQC01, containerType, method, instrumentControlSoftware, acquisitionType, area, folder, testmethods, replicates, download, generate, lcSystem, instrument
debug output$download values$wuid=315372
debug output$download values$wuid=315372
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/Rtmp2uAMxc/file10345d54d5060c.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  36258
containerid =   36302
debug output$download values$wuid=315378
debug output$download values$wuid=315378
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/Rtmp2uAMxc/file10345d19677454.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  35849
debug output$download values$wuid=315420
debug output$download values$wuid=315420
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/Rtmp2uAMxc/file10345d352554.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  28115
debug output$download values$wuid=315452
debug output$download values$wuid=315452
System configuration:   
debug output$download values$wuid=
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
read login pfeeder.
System configuration: Proteomics XCalibur 
debug output$download values$wuid=
read webservicepassword for login pfeeder.
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
System configuration: Proteomics XCalibur M-CLASS48_48
debug output$download values$wuid=
debug output$download values$wuid=
Composing XCalibur MS configuration file /tmp/Rtmp2uAMxc/file10345d1982d066.csv ...
Warning in write.table(res, file = fn, sep = ",", row.names = FALSE, append = TRUE,  :
  appending column names to file
containerid =  36367
debug output$download values$wuid=315506
debug output$download values$wuid=315506


Execution halted