Listening on http://127.0.0.1:45571 Warning: Error in [[: attempt to select less than one element in get1index 99: paste 97: renderTable [/export/data01/shiny/rawrr/server.R#37] 96: func 83: renderFunc 82: output$statistics 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#127] 96: func 83: renderFunc 82: output$peptides 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#136] 96: func 83: renderFunc 82: output$ions 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#146] 96: func 83: renderFunc 82: output$fragments 1: runApp Warning: Error in [[: attempt to select less than one element in get1index 114: paste 97: renderUI [/export/data01/shiny/rawrr/server.R#161] 96: func 83: renderFunc 82: output$tabs 1: runApp processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 12 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 68700 number of rows = 68700 Warning: `aes_string()` was deprecated in ggplot2 3.0.0. ℹ Please use tidy evaluation ideoms with `aes()` Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0. ℹ Please use `linewidth` instead. Warning: Error in [[: attempt to select less than one element in get1index 99: paste 97: renderTable [/export/data01/shiny/rawrr/server.R#37] 96: func 83: renderFunc 82: output$statistics 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#127] 96: func 83: renderFunc 82: output$peptides 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#136] 96: func 83: renderFunc 82: output$ions 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#146] 96: func 83: renderFunc 82: output$fragments 1: runApp Warning: Error in [[: attempt to select less than one element in get1index 114: paste 97: renderUI [/export/data01/shiny/rawrr/server.R#161] 96: func 83: renderFunc 82: output$tabs 1: runApp processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 3 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 17154 number of rows = 17154 processXIC ... lenght of X 6 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 34308 number of rows = 34308 processXIC ... lenght of X 3 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 17154 number of rows = 17154 processXIC ... lenght of X 3 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 63 number of rows = 63 processXIC ... Warning in predict.lm(fit, data.frame(xc = xx)) : prediction from a rank-deficient fit may be misleading Warning in predict.lm(fit, data.frame(xc = xx)) : prediction from a rank-deficient fit may be misleading lenght of X 3 lenght of y 9 lenght of y 9 lenght of y 9 subsetting ... number of rows = 600 number of rows = 600 processXIC ... lenght of X 3 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 33 number of rows = 33 processXIC ... Warning in predict.lm(fit, data.frame(xc = xx)) : prediction from a rank-deficient fit may be misleading Warning in predict.lm(fit, data.frame(xc = xx)) : prediction from a rank-deficient fit may be misleading lenght of X 3 lenght of y 9 lenght of y 9 lenght of y 9 subsetting ... number of rows = 600 number of rows = 600 processXIC ... lenght of X 3 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 17154 number of rows = 17154 Warning: Error in [[: attempt to select less than one element in get1index 99: paste 97: renderTable [/export/data01/shiny/rawrr/server.R#37] 96: func 83: renderFunc 82: output$statistics 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#127] 96: func 83: renderFunc 82: output$peptides 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#136] 96: func 83: renderFunc 82: output$ions 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/shiny/rawrr/server.R#146] 96: func 83: renderFunc 82: output$fragments 1: runApp Warning: Error in [[: attempt to select less than one element in get1index 114: paste 97: renderUI [/export/data01/shiny/rawrr/server.R#161] 96: func 83: renderFunc 82: output$tabs 1: runApp processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 0 processXIC ... lenght of X 3 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 17154 number of rows = 17154 number of rows = 17154 processXIC ... lenght of X 6 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 17286 number of rows = 17286 number of rows = 17286 processXIC ... lenght of X 3 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 132 number of rows = 132 processXIC ... lenght of X 6 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 264 number of rows = 264 number of rows = 264 processXIC ... lenght of X 12 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 5994 number of rows = 5994 number of rows = 5994 number of rows = 5994 Warning: Error in ggplot2::facet_wrap: `nrow` must be a positive scalar integer or "NULL" 174: 173: signalCondition 172: signal_abort 171: rlang::abort 170: cli::cli_abort 169: ggplot2::facet_wrap 168: renderPlot [/export/data01/shiny/rawrr/server.R#373] 166: func 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$xicPlot 1: runApp number of rows = 5994 number of rows = 5994 number of rows = 5994 number of rows = 5994 processXIC ... lenght of X 24 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 lenght of y 7 subsetting ... number of rows = 137400 number of rows = 137400 Execution halted